Mendels Accountant is featured project at sourceforge.net in genetics and bioinformatics , It works on Linux systems and Windows . Mendels Accountant is a biologically realistic, forward-time, parallel, numerical simulation program which models genetic change within a population, as affected by mutation and selection . Mendel’s Acc. authors wrote very optimized documentation and manual for users and ...
NeuroML is an XML-based description language for defining and exchanging neuronal cell, network and modeling data including reconstructions of cell anatomy, membrane physiology, electrophysiological data, network connectivity, and model specification . Aims of NeuroML as mentioned on NeuroML website : To create specifications for a language in XML to describe the biophysics, anatomy and network ...
Open source , projects are the most widely supported world wide , in many fields , but somehow , Open source is not active concept in medical and health care area , though there are many famous widely used open source medical projects , even though those projects don’t have powerful communities even they have ...
Bioinformatics links Directory : As a directory , its well organized , rich , and easy to browse , search and access . its very promising and quite old but outstanding project , to make a directory to list , archive and categorize all bioinformatics tools , resources , links , softwares , and tutorials ...
Avogadro Open source free cross-platform application , aimed to be an advanced molecular editor , and to be used in computational chemistry , molecular modeling , bioinformatics , materials science and related areas . OS : Avogadro is available for Linux , Mac OSX and Windows . License : Released under GNU GPL . Translation ...
Bowtie : is multi-platform package built for quickly aligning large sets of short DNA sequences read to large genomes . . Bowtie is an ultrafast, memory-efficient short read aligner geared toward quickly aligning large sets of short DNA sequences (reads) to large genomes. It aligns 35-base-pair reads to the human genome at a rate of ...
Skittle is a Genome Viewer application , built for 2D Visualization of genome sequence files . Skittle assigns four colors to the four nucleotides and the text warps the sequence to create a 2D picture based on DNA sequence . Skittle an ongoing bioinformatics project. It started as a two dimensional visualization of DNA sequences. ...
GenExplorder is an outstanding educational tool to help students to understand the ” central dogma ” of Molecular biology , GenExplorer allows students to demonstrate and simulate many process of Molecular biology , as student can track the flow of informationfrom the sequence of base pairs in the DNA of a gene through thedecoding to ...
LOVD ” Leiden Open (source) Variation Database ” is an open source free database built for collecting and displaying variants in the DNA sequence . LOVD focuses on the combination between a gene and a genetic (heritable) disease. Sequence variants found in patients are collected in the database , with the information about the variants ...
caDNAno is a free and open source software for designing a 3D DNA origami , its built with Adobe AIR so its cross-platform application , all it require is Adobe AIR to be installed on your system . caDNAno is released under MIT license , The developer is offering the open source code and AS3 ...