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Archive for the ‘Simulation’ Category

Mendel’s Accountant open source Genetic timeline Modeling and simulation software

Mendel's Accountant  open source Genetic timeline Modeling and simulation software

Mendels Accountant is featured project at sourceforge.net in genetics and bioinformatics , It works on Linux systems and Windows . Mendels Accountant  is a biologically realistic, forward-time, parallel, numerical simulation program which models genetic change within a population, as affected by mutation and selection .   Mendel’s Acc. authors wrote very optimized documentation and manual for users and ...

NeuroML : Open source Model Descriptions for Computational Neuroscience

NeuroML : Open source Model Descriptions for Computational Neuroscience

NeuroML is an XML-based description language for defining and exchanging neuronal cell, network and modeling data including reconstructions of cell anatomy, membrane physiology, electrophysiological data, network connectivity, and model specification . Aims of NeuroML as mentioned on NeuroML website : To create specifications for a language in XML to describe the biophysics, anatomy and network ...

OpenWalnut Open source brain data visualization

09.30.2011 · Posted in Open source, Simulation, Visualization

OpenWalnut Open source brain data visualization

OpenWalnut is an open source multi-platform tool for multi-modal medical and brain data visualization. Its universality allows it to be easily extended and used in a large variety of application cases. It is both, a tool for the scientific user and a powerful framework for the visualization researcher. Developer note : Written in C , ...

Avogadro : Open source advanced molecular editor for Windows , Linux & Mac OSX

Avogadro : Open source advanced molecular editor for Windows , Linux & Mac OSX

Avogadro Open source free cross-platform application , aimed to be an advanced molecular editor , and to be used in computational chemistry , molecular modeling , bioinformatics , materials science and related areas . OS : Avogadro is available for Linux , Mac OSX and Windows . License : Released under GNU GPL . Translation ...

GenExplorer : Open source Educational tool for simulation Molecular biology

GenExplorer : Open source Educational tool for simulation Molecular biology

GenExplorder is an outstanding educational tool to help students to understand the ” central dogma ” of Molecular biology , GenExplorer allows students to demonstrate and simulate many  process of Molecular biology , as student can track the flow of informationfrom the sequence of base pairs in the DNA of a gene through thedecoding to ...

Foldit : a 3d Protein Folding game : Playing science : how gaming helps research ! download for Windows , Linux and Mac OSX .

Foldit :  a 3d Protein Folding game : Playing science : how gaming helps research ! download for Windows , Linux and Mac OSX .

When first i found i could not believe , thats finally gaming can be for a good cause , and what a game : the idea is brilliant as gaming for contributing in research and end with helping patients . Well Foldit team actually done it , They aimed to create ” a revolutionary new ...

GIMIAS Medical Image Analysis and Simulation Solution for Windows and Linux

GIMIAS Medical Image Analysis and Simulation Solution for Windows and Linux

GIMIAS : is a medical imaging  project aimed to be workflow-oriented medical simulation and medical image analysis platform , and to solve biomedical image simulation problems . GIMIAS is extend-able through plugins as its also multi-platform ” works for windows and linux platforms ” , its developed using C++ . It provides Windows 23  bits ...

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